Korean Journal of Breeding Science :eISSN 2287-5174 / pISSN 0250-3360

Table. 2.

Statistics of raw reads, trimmed reads, and mapped reads obtained from next generation resequencing data.

Plant materialUseRaw readsTotal readsMapped reads

Total length (bp)Total length (bp)Trimmed/RawGenome coverageThe number of mapped reads (The ratio of mapped reads, %)Mapped region of reference genome (bp)Reference genome coverage (%)
‘920533Female parent17,762,375,52613,598,385,369≒0.77≒38.27980,972,784 (80.0)320,192,18890.13
‘PI 189225’Male parent116,791,415,02413,071,171,856≒0.78≒36.79587,354,113 (89.84)305,232,56185.92
Korean J Breed Sci 2018;50:424-33 https://doi.org/10.9787/KJBS.2018.50.4.424
© 2018 Korean J Breed Sci