Korean Journal of Breeding Science :eISSN 2287-5174 / pISSN 0250-3360

Table. 2.

Putative QTLs detected for blast resistance in BIL population.

QTL Trait Chr. no. Franking marker Loc. (cM)z No.y LOD Add. R2 (%) Known gene
qBn2.1 13IS 2 aa02000707-aa02000735 30.2 1) 5.79 -3.77 16.1 Pi14(t), Pi16(t)
qBn2.2 13CW 2 aa02000735-aa02000854 50.3 5.17 -2.58 5.4 -
14IS 4.55 1.42 1.2
qBn2.3 13CW 2 ab02000380-aa02001544 80.5 2) 3.37 -3.65 28 Pid1(t)
qBn2.4 13IS 2 aa02001611-aa02003334 110.6 3.30 -4.45 12 -
qBn4.1 13IS 4 aa04002941-aa04005730 16.7 3) 3.21 -3.11 16.1 -
13CW 4.83 -3.34 18.8
14UB 3.92 -4.12 15.7
qBn4.2 13CW 4 aa04009401-aa04008763 109.9 5.68 -3.76 38.9 Pi39(t), qBR4-2
qBn7.1 14UB 7 ac07000428-ac07000431 72.2 3.12 -2.43 9.7 -
qBn7.2 13IS 7 aa07002123-aa07007149 105.6 4) 3.07 -4.01 16.3 Pi17(t)
14UB 3.25 -3.07 12.5
qBn11.1 13CW 11 aa11002722-ac11000367 54.3 5) 4.09 -3.61 41.4 PiCO39(t), Piy(t), Pilm-2, Pi30(t),
14UB 6.44 -4.73 45.8
qBn11.2 13IS 11 aa11007380-aa11004506 99.2 6) 6.87 -4.42 56.7 PikK-h, Pi44(t), Pi54, Pb1
qBn12 13IS 12 aa12001361-aa12004168 39.4 3.49 2.68 1.5 Pi6(t), Pi12(t), Pi21(t), Pitq6

zcM from TIGER.

y1) http://ensembl.gramene.org/Oryza_sativa/Location/View?r=2:5602152-5602184;tl=3dbFJJCQfrddC3VV-111994-36453780 (aa02000707),

2) http://ensembl.gramene.org/Tools/Blast?db=core# (ab02000380)

2.1) http://ensembl.gramene.org/Oryza_sativa/Location/View?r=2:22533216-22533248;tl=PI8dyiYgCzDyotv5-112007-36454873 (aa02001544),

3) http://ensembl.gramene.org/Oryza_sativa/Location/View?r=4:5377231-377263;tl=IbORbwFNGM3saFKw-111997-36453791 (aa04002941),

4) http://ensembl.gramene.org/Oryza_sativa/Location/View?r=7:19825482-19825514;tl=1ASBUtxW3ut8tpBV-111999-36454037 (aa07002123),

5) http://ensembl.gramene.org/Oryza_sativa/Location/View?r=11:9053318-9053350;tl=IHzXebA61jZZ94kt-112004-36454821 (aa11002722),

6) http://ensembl.gramene.org/Oryza_sativa/Location/View?r=11:26199257-26199289;tl=RVawVDHz2uAOnidf-112005-36454834 (aa11007380).

Korean J Breed Sci 2019;51:395-403 https://doi.org/10.9787/KJBS.2019.51.4.395
© 2019 Korean J Breed Sci