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"Song-Hee Park"

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TCS 기반 SNP 분석을 통한 한국 밥쌀용 벼 품종의 유전적 다양성 및 구조적 네트워크 분석
Genetic Diversity and Structural Network Analysis of Korean Rice Varieties Using TCS-based SNPs
Chang-Min Lee, Hyun-Su Park, Jeonghwan-Seo, Song-Hee Park, O-Young Jeong, Keon-Mi Lee, Seul-Gi Park
Korean. J. Breed. Sci. 2026;58(1):1-12.
Published online March 1, 2026
DOI: https://doi.org/10.9787/KJBS.2026.58.1.1

In the present study, we conducted a detailed analysis of the genetic diversity and structural organization of 96 domestic Korean rice varieties (Oryza sativa L.) using 2,565 high-resolution TCS-based single nucleotide polymorphism (SNP) markers. Genetic structural variations were investigated using diversity indices, PCA, genetic similarity, and network analysis. Genetic diversity analysis revealed a significant expansion of the genetic foundation after the 1980s, marked by a sharp increase in the number of alleles (Na) from the 2000s. Despite this, high genetic homogeneity was maintained, with an average similarity of 77.7%. The observed 10% difference among same-cross varieties suggests that critical genetic variations are fixed by strong selection pressures for quality traits. Network analysis (85% similarity threshold) confirmed that the Korean rice breeding population followed a distinct core-periphery model (eight communities). The connected 84 varieties had a centrality range of 0.01 0.39. Core Variety Groups (e.g., ‘Junam’ and ‘Sindongjin’) exhibited the highest centrality (up to 0.39), indicating their extensive use as key breeding parents and their function as the central axis of the genetic network. Bridge Variety Groups (e.g., ‘Hwayeong’ and ‘Samkwang’) played an intermediary role linking clusters. Crucially, 12 ‘isolated accessions’ showed zero centrality (0.00), representing a genetic disconnect from the main pool. This quantitative network-based assessment provides essential fundamental data for breeders to select appropriate germplasms. Furthermore, the findings suggest that the current cultivar naming system, which inadequately reflects genetic relationships, requires reassessment, and that the establishment of
objective
management standards based on this research is warranted.

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New Cultivar Developed
중만생 고품질 직파 및 이앙 재배적응 벼 품종 ‘새봉황’
‘Saebonghwang’: A High Grain Quality Mid-Late-Maturing Rice Cultivar Adaptable to Direct Seeding and Transplanting Cultivation
Chang-Min Lee, Choon-Song Kim, Woon-Chul Shin, Man-Kee Baek, Hyun-Su Park, Jong-Cheol Ko, Jeong-Ju Kim, Jung-Pil Suh, O-Young Jeong, Keon-Mi Lee, Jeonghwan Seo, Song-Hee Park, Dongmin Back, Hyeonsoo Jang
Korean. J. Breed. Sci. 2024;56(2):147-159.
Published online June 1, 2024
DOI: https://doi.org/10.9787/KJBS.2024.56.2.147

‘Saebonghwang’ was developed as a mid-late ripening rice variety with good cultivation stability and yield in transplanting and under direct seeding cultivation. It was bred by backcrossing ‘Hopum’, which has excellent cultivation stability and adaptability to direct seeding, as a repeat parent, and ‘Hitomebore,’ a Japanese rice variety with excellent taste, as a donor. The heading date of ‘Saebonghwang’ was August 11 under ordinary planting, which is two days earlier than that of ‘Nampyeong’, and August 13 under wet-direct seeding cultivation, which is the same as that of ‘Dongan’. ‘Saebonghwang’ had a culm length of 74 cm under wet-direct seeding cultivation, which is larger than that of ‘Dongan’ (69 cm), and had good cultivation stability, including lodging resistance. ‘Saebonghwang’ is resistant to bacterial leaf blight and rice stripe virus and shows moderate resistance to rice blast. Furthermore, ‘Saebonghwang’ has better grain appearance, superior taste and better milling characteristics than ‘Nampyeong’. The yield of ‘Saebonghwang’ when cultivated under ordinary planting, wet-direct seeding, and double cropping was 5.65, 5.37, and 5.37 MT/ha, respectively. Under wet direct sowing by drone cultivation, ‘Saebonghwang’ showed good initial survival rate and cultivation stability. The yield was 4.49 MT/ha, slightly lower than that obtained under transplanted cultivation (5.03 MT/ha), but was not statistically different; therefore, ‘Saebonghwang’ was adjudged to be adaptable to drone wet-direct seeding. ‘Saebonghwang’ can be used in various ways to suit the working conditions of farms, increase farm work efficiency, and expand the area of wet direct-seeding cultivation (Registration No. 9171).

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