‘Seongsan’, an early multi-resistant japonica rice cultivar developed from a cross between ‘Jopyeong’ and ‘Jungmo 1012’, was developed by the rice breeding team of the National Institute of Crop Science, Rural Development Administration. The average heading date at the ordinary planting was July 25th in seven test spots. In response to physiological stresses, premature heading rate was very low and viviparous germination rate was relatively low (15.7%). In response to biotic stresses, ‘Seongsan’ showed resistance to bacterial blight pathogen K1 to K3, rice stripe virus, and blight leaf. The milled rice of ‘Seongsan’ was translucent with relatively clear non-glutinous endosperm and medium short grain. The cooked rice had good palatability compared with that of ‘Chucheong’. The milled rice yield of this variety was approximately 5.52 MT/ha in a three-year local adaptability test. ‘Seongsan’ was an early maturing multi-resistant rice with good grain quality, and it was expected to be used as a representative for maturity diversification of rice cultivation area (Registration No. 7277).

It is reported that the absence of lipoxygenase-3 (LOX-3) may contribute to a reduction in stale flavor after the storage of rice. To improve the quality of stored rice of the Korean japonica rice cultivar, we conducted a breeding program to develop near-isogenic rice without LOX-3 in the genetic background of Saenuri, a mega variety of Korea. In the first step of the breeding program, we used a donor parent of LOX-3 null, Daw Dam, and a recurrent japonica parent, Sindongjin, to develop HR27873-AC12 by backcross (BC₁), color test for introgression of lox-3, and anther culture for rapid fixation. In the second step, we used the donor parent, HR27873-AC12, and the recurrent parent, Saenuri, to develop HR28896-31-3-1-1 by backcross (BC₁), marker-assisted selection (MAS) for lox-3, and phenotypic selection (PS) for agronomic traits. Finally, in the third step, we developed HR30960-186-2-1-2-1 (Jeonju624), derived from a cross between Saenuri and HR28896-31-3-1-1, by MAS for lox-3 and PS with high selection pressure for agronomic characteristics. Jeonju624 was confirmed with the introgression of lox-3 by molecular marker. Jeonju624 was a mid-late maturing rice with similar agronomic characteristics to Saenuri, lodging tolerance with short culm, erect plant architecture, and resistance to bacterial blight and rice stripe virus. The yield components of Jeonju624 were mostly similar to Saenuri, except for the 1,000-grain weight of brown rice. The appearance of the grain of Jeonju624 was better than that of Saenuri, and the characteristics of cooked rice were similar to those of Saenuri. In the genetic background analysis using 406 KASP (Kompetitive Allele-Specific PCR) markers, Jeonju624 was confirmed to be the near-isogenic line (NIL) of Saenuri with a 95.8% recovery rate. Jeonju624 is the NIL of Saenuri without LOX-3, and overcomes the linkage drag of Daw Dam with similar agronomic characteristics and genetic background to Saenuri. Jeonju624 can be utilized as a practical cultivar to improve the quality of stored rice, breeding material for the introgression of lox-3, and genetic material to elucidate the effect of introgressed genes.

To enhance rice yield and diversify grain quality of Korean japonica rice, we developed japonica rice line with long and spindle-shaped grain. Korean japonica rice cultivars have narrow genetic background of grain size and shape. Most of cultivars show medium-short and semi-round grain. To diversify the genetic background for grain, we developed Jeonju625, japonica rice line with long and spindle-shaped grain, derived from a cross between DSG79, the breeding material with extra-long and spindle-shaped grain, and Boramchan, japonica super high-yielding cultivar with medium-short and semi-round grain. Jeonju625 had GW2gs3qSW5+qGL3 allele type for grain-related genes, which conferred extra-long and spindle-shaped grain. The grain length and ratio of length to width of brown rice of Jeonju625 was 7.06 mm and 2.72, respectively. Jeonju625 was improved the deteriorated traits of DGS79, very late heading, long culm, long awn, droopy flag leaves, and susceptibility to lodging, by strong selection pressure focused on field breeding. The milled rice yield of Jeonju625 was 559 kg/10a, which was similar level of Boramchan (552 kg/10a) and 29% enhanced yield compared to DSG79. Jeonju625 had suitable characteristics for cooked rice. Jeongju625 showed lower protein contents and better glossiness and palatability of cooked rice than Boramchan and Hanareum2. Elite japonica rice line, Jeonju625, with extra-long and spindle-shaped grain showed good characteristics for rice yield and grain quality. Jeonju625 could be utilized practical cultivar and breeding material for enhancing rice yield and diversifying grain quality.

To diversify the grain size and shape of japonica rice, we developed the Breeding Materials with Diverse Grain Size and Shape (BM_DGS) and characterized the grain and yield-related traits. We used the donor parents Jizi1560 and Jizi1581, japonica germplasm with extremely large grain size. Four cross combinations between the each donor parents and Korean high yielding japonica rice cultivars, Deuraechan and Boramchan, were constructed and anther culture method was applied. Among 290 doubled haploid lines, we selected 91 elite lines with diverse grain size and shape and designated to the BM_DGS. The grain size and shape of BM_DGS exhibited beyond the characteristics of previously developed Korean rice cultivars. The alleles of major grain-related genes, GW2, GS3, and qSW5, in BM_DGS showed two types, wild type or loss-of-function mutant type. The loss-of-function mutant alleles, gw2, gs3, and qSw5, had an effect on increasing grain size. The phenotypic variation of grain length was mostly controlled by GS3 alleles, and grain width and thickness were influenced by the combinations of GW2 and qSW5 alleles. 1,000-grain weight was determined by the combinations of GW2, GS3, and qSW5. The grain-related genes influenced the phenotypic variation of yield-related traits. The result of this study could be useful to elucidate the relationship between the grain-related genes and agronomic traits. And the BM_DGS are being utilized in the breeding programs to diversify the grain size and shape in japonica rice.