Skip to main navigation Skip to main content

Korean. J. Breed. Sci. : Korean Journal of Breeding Science

OPEN ACCESS
ABOUT
BROWSE ARTICLES
EDITORIAL POLICIES
FOR CONTRIBUTORS

Page Path

2
results for

"microsatellite"

Article category

Keywords

Publication year

Authors

"microsatellite"

Articles
밀 유전자원의 농업형질과 SSR마커를 이용한 다양성 분석
Diversity Analysis Using Agricultural Traits and SSR Markers of Wheat Germplasms
Myoung-Jae Shin, Miae Oh, Kyung-Min Kim, Xiaohan Wang, Seong-Hoon Kim, Seahee Han, Kebede Taye Desta, Yu-Mi Choi, Hye-myeong Yoon, Yoonjung Lee, Jung Yoon Yi, Sukyeung Lee
Korean. J. Breed. Sci. 2022;54(4):345-357.
Published online December 1, 2022
DOI: https://doi.org/10.9787/KJBS.2022.54.4.345

Breeders typically use core collections of a specific trait or core collections selected by a few genotypes to efficiently select breeding materials or to study functional genes. As a result, many accessions have been deemed redundant or duplicated and are no longer considered for use. This study aimed to investigate the agronomical characteristics and genetic diversity of 1,514 previously unused and unstudied wheat germplasms and to confirm their value as breeding materials using population structure analysis. The performance of these wheat germplasms was compared with that of 8,878 wheat breeding materials and 72 known Korean wheat cultivars. The results of agronomic trait diversity comparison showed that the germplasm populations used for breeding research did not completely encompass the unused germplasm populations. The agronomic traits of wheat germplasms varied greatly. ANOVA and PCA results revealed the greatest differences in growth habits (CV=0.339), panicle length (CV=0.330), and awn length (CV=0.296). To accurately assess the value of unused wheat germplasms as breeding materials, 106 SSR markers were extracted from the analysis of four representative Korean cultivars: Geuru, Geumgang, Uri, and Jokyoung. Among these, 24 SSR markers were chosen, and 129 wheat resources were subjected to population structure analysis, which revealed five subpopulations. Most of the 34 germplasms that originated in Korea were distributed in subpopulation 1 (18 accessions, 52.9%) and subpopulation 4 (12 accessions, 35.3%). Subgroups 2, 3, and 5 differed significantly in agronomic traits and genotypes, indicating their potential as breeding materials. The findings of this study could serve as a foundation for breeders and aid in the discovery and utilization of new wheat breeding materials.

  • 9 View
  • 0 Download

Pear (Pyrus spp.) is an economically important fruit tree that grows extensively worldwide. To facilitate the identification of agronomically important traits and provide new information for genetic and genomic research concerning this fruit tree, a high-density genetic linkage map of pear was constructed using 178 F1 populations derived from a cross between ‘Manpungbae’ and ‘Oharabeni’. Single nucleotide polymorphisms (SNPs) detected by genotyping-by-sequencing (GBS) and simple sequence repeats (SSRs) developed from pears were analyzed to construct a genetic linkage map. SSR markers were used to locate the corresponding chromosome number for each linkage group (LG). A total of 1,807 GBS-SNPs and 41 SSRs were anchored to the integrated genetic linkage map. Seventeen LGs were identified, covering a genetic distance of 1,519.4 cM with an average marker density of 0.87 cM. The lengths of the LGs ranged from 70.9 cM (LG 14) to 160.4 cM (LG 15). Each LG had SSR markers from 1 to 5, except for LGs 7, 8, and 9. Our integrated genetic map of pear could be used as a basic frame map for comparative analysis of genomic structure between different pear research groups.

  • 7 View
  • 0 Download