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국내 재래종 콩( ) 유전자원의 지리적 특성변이와 유전적 다양성

Morphological Characteristics and SSR Profilings of Soybean Landraces of Korea

Korean Journal of Breeding Science 2014;46(4):353-363.
Published online: October 31, 2014

1 농촌진흥청 국립농업과학원

1 National Academy of Agricultural Science, RDA, Jeonju 560-500. Republic of Korea

2 농촌진흥청

2 Rural Development Administration, Jeonju 560-500. Republic of Korea

*Corresponding Author : msyoon63@korea.kr
• Received: September 15, 2014   • Revised: October 17, 2014   • Accepted: October 22, 2014

© Tshe Korean Society of Breeding Science All rights reserved

This is an Open-Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

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  • Genetic Diversity Analysis of Soybean Collection Using Simple Sequence Repeat Markers
    Alibek Zatybekov, Moldir Yermagambetova, Yuliya Genievskaya, Svetlana Didorenko, Saule Abugalieva
    Plants.2023; 12(19): 3445.     CrossRef
  • Genetic Diversity Patterns and Discrimination of 172 Korean Soybean (Glycine max (L.) Merrill) Varieties Based on SSR Analysis
    Tae-Young Hwang, Byeong Sam Gwak, Jwakyung Sung, Hong-Sig Kim
    Agriculture.2020; 10(3): 77.     CrossRef

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Morphological Characteristics and SSR Profilings of Soybean Landraces of Korea
Korean. J. Breed. Sci.. 2014;46(4):353-363.   Published online December 31, 2014
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Korean. J. Breed. Sci.. 2014;46(4):353-363.   Published online December 31, 2014
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Morphological Characteristics and SSR Profilings of Soybean Landraces of Korea
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Fig. 1. Frequency distribution of qualitative traits including growth habit, flower color and pubescence color in soybean landraces by collecting sites of Korea. * GW: Gangwon, GG: Gyeonggi, GN: Gyeongnam, GB: Gyeongbuk, JN: Jeonnam, JB: Jeonbuk, JJ: Jeju, CN: Chungnam, CB: Chungbuk ** The qualitative traits of check variety. Growth habit : all determinate, Flower color : Taekwangkong (purple), Daewonkong (white), Ilpumgeonjeongkong (purple), Pungsan-namulkong (purple), Pubescence color : Taekwangkong (gray), Daewonkong (gray), Ilpumgeonjeongkong (tawny), Pungsan-namulkong (gray)
Fig. 2. Frequency distribution of seed qualitative traits including seed coat color, cotyledon color, hilum color and seed coat lust in soybean landraces by collecting sites of Korea. * GW: Gangwon, GG: Gyeonggi, GN: Gyeongnam, GB: Gyeongbuk, JN: Jeonnam, JB: Jeonbuk, JJ: Jeju, CN: Chungnam, CB: Chungbuk ** The seed qualitative traits of check variety. Seed coat color : Taekwangkong (yellow), Daewonkong (yellow), Ilpumgeonjeongkong (black), Pungsan-namulkong (yellow), Hilum color : Taekwangkong (yellow), Daewonkong (yellow), Ilpumgeonjeongkong (black), Pungsan-namulkong (yellow), Seed coat lust : Taekwangkong (shiny), Daewonkong (dull), Ilpumgeonjeongkong (shiny), Pungsan-namulkong (dull), Cotyledon color : Ilpumgeonjeongkong (yellow)
Morphological Characteristics and SSR Profilings of Soybean Landraces of Korea

Morphological character descriptors invested in this study.

Characters Methods Rank or measurement unit Remarks

Growth habit 1. Deteminate Observation At the end of growth
2. Indeterminiate
3. Semi-determinate

Flower color Observation 1. White Color of blooming flowers
2. Purple

Days to flowering Calculation Days -

Days to maturity Calculation Days -

Days from planting to maturity Calculation Days -

Pubescence color Observation 1. No hair Pubescence color at maturity
2. Gray
3. Tawny
4. Dark tawny
Seed coat color Observation 1. Yellowing white Seed coat color of mature seed
2. Yellow
3. Yellowing green
4. Green
5. Yellowing brown
6. Brown
7. Gray
8. Black

Seed coat lust Observation 1. Shiny Seed coat lust of mature seed
2. Dull

Hilum color Obs 1. Yellow Hilum color of matured seed
2. Light brown
3. Brown
4. Dark brown
5. Green
6. Light black
7. Black

Cotyledon color Observation 1. Yellow Only for the black seed
2. Green

100 seed weight Calculation Weight(g) Weigh the 100 seed weight

Distribution of days to flowering, to maturity, from planting to maturity of the soybean landraces by collecting sites of Korea.

Traits Distribution rates of traits by collecting sites(%) Statistics(days)

GW* GG GN GB JN JB JJ CN CB Min Max. Aver.

Days to flowering 60> 1.2 3.0 0.0 1.6 3.7 2.4 3.7 4.0 0.0 51 104 74.7 ±7.45
61-70 63.1 30.3 25.7 31.3 22.0 25.3 14.8 27.7 23.7
71-80 26.2 45.5 50.0 39.6 36.7 45.8 29.6 36.6 40.8
81-90 9.5 19.7 22.4 26.9 37.6 26.5 51.9 30.7 35.5
90< 0 1.5 2.0 0.5 0.0 0.0 0.0 1.0 0.0

Aver.(days) 69.5 73.5 74.9 74.3 75.4 74.7 77.9 74.7 76.1

Days to maturity 40> 1.2 0.0 0.0 0.0 0.0 1.2 0.0 0.0 0.0 28 106 72.2 ±8.79
41-60 4.8 13.6 11.2 6.6 13.8 10.8 14.8 12.9 3.9
61-80 86.9 81.8 80.3 82.4 75.2 84.3 66.7 72.3 84.2
81-100 7.1 4.5 8.6 11.0 11.0 3.6 14.8 14.9 11.8
101< 0.0 0.0 0.0 0.0 0.0 0.0 0.0 3.7 0.0 0.0

Aver.(days) 71.0 70.4 70.5 73.5 71.8 70.0 74.9 73.5 75.4

Days from planting to maturity 101-120 2.4 4.5 2.0 1.1 3.7 7.2 0.0 4.0 0.0 101 188 146.6 ±12.89
121-140 51.2 33.3 35.5 24.2 26.6 27.7 25.9 25.7 18.4
141-160 38.1 47.0 42.1 53.8 43.1 48.2 18.5 33.7 52.6
161-180 8.3 15.2 19.7 20.9 26.6 16.9 55.6 36.6 28.9
181< 0.0 0.0 0.7 0.0 0.0 0.0 0.0 0.0 0.0

Aver.(days) 140.6 143.9 145.4 147.8 147.2 144.7 152.8 148.3 151.6

*GW: Gangwon, GG: Gyeonggi, GN: Gyeongnam, GB: Gyeongbuk, JN: Jeonnam, JB: Jeonbuk, JJ: Jeju, CN: Chungnam, CB: Chungbuk

**Days to flowering, to maturity, days from planting to maturity of check variety : Teakwangkong(78, 55, 133days), Daewonkong(65, 78, 143days), Ilpumgeomjeongkong(62, 67, 129days), Pungsan-namulkong(78, 68, 146days), respectively

The distribution of 100- seed- weight of soybean landraces by collecting sites of Korea.

100-seed weight 9.9g > (%) 10~14.9 15~24.9 25~34.9 35 < Mean (g)

GW* 3.6 9.5 33.3 45.2 8.3 24.5
GG 4.5 6.1 21.2 43.9 24.2 28.3
GN 4.6 13.8 38.2 36.8 6.6 22.7
GB 1.6 8.2 30.8 46.7 12.6 26.5
JN 5.5 9.2 32.1 41.3 11.9 25.3
JB 4.8 8.4 38.6 37.3 10.8 24.9
CN 5.0 4.0 25.7 25.7 39.6 29.1
CB 2.6 5.3 23.7 31.6 36.8 29.0
JJ 0.0 14.8 14.8 40.7 29.6 28.1
Mean 3.8 8.8 30.8 39.2 17.5 26.1

*GW: Gangwon, GG: Gyeonggi, GN: Gyeongnam, GB: Gyeongbuk, JN: Jeonnam, JB: Jeonbuk, JJ: Jeju, CN: Chungnam, CB: Chungbuk

**100-seed-weight of check variety : Teakwangkong 23.2 g, Daewonkong 22.5 g, Ilpumgeomjeongkong 27.3 g, Pungsan-namulkong 11.9 g

SSR markers used in this study, their associated chromosome number, major allele frequency, allele size range, the number of alleles per locus, gene diversity, heterozygosity, and polymorphism information content (PIC)

Marker Chromosome Number Major allele frequency Allele size range Allele no. per locus Gene diversity Heterozygosity PIC

Satt146 13 0.3814 154-328 12 0.7409 0.0429 0.7009
Satt173 10 0.2608 117-345 26 0.8412 0.0317 0.8241
Satt182 19 0.6043 116-235 15 0.5434 0.1043 0.4760
Satt270 20 0.4097 140-243 15 0.7438 0.0143 0.7101
Satt307 6 0.3854 140-200 10 0.7371 0.0458 0.0458
Satt390 8 0.6786 175-241 11 0.5024 0.060 0.4676
Satt537 2 0.2392 114-202 21 0.8709 0.0173 0.8584
Mean 0.4228 15.7 0.7114 0.0375 0.6762

Major allele frequency, the number of alleles, gene diversity, heterozygosity, polymorphism information content(PIC) based on soybean landraces by collecting sites of Korea.

collecting sites Major Allele Frquency Allele no. per locus Gene Diversity Heterozygosity PIC

GW* 0.4233 6.3 0.6990 0.0677 0.6559
GG 0.4307 7.3 0.6881 0.0433 0.6522
GN 0.4691 6.6 0.6527 0.0153 0.6120
GB 0.4153 9.7 0.7142 0.0187 0.6751
JN 0.4090 9.4 0.7190 0.0439 0.6865
JB 0.4894 5.9 0.6420 0.0422 0.5891
CN 0.4515 6.4 0.6671 0.0476 0.6226
CB 0.4756 6.1 0.6530 0.0261 0.6095
JJ 0.4083 7.6 0.7234 0.0643 0.6930
Mean 0.4414 7.3 0.6843 0.0410 0.6440

*GW: Gangwon, GG: Gyeonggi, GN: Gyeongnam, GB: Gyeongbuk, JN: Jeonnam, JB: Jeonbuk, JJ: Jeju, CN: Chungnam, CB: Chungbuk

Table 1. Morphological character descriptors invested in this study.
Table 2. Distribution of days to flowering, to maturity, from planting to maturity of the soybean landraces by collecting sites of Korea.

GW: Gangwon, GG: Gyeonggi, GN: Gyeongnam, GB: Gyeongbuk, JN: Jeonnam, JB: Jeonbuk, JJ: Jeju, CN: Chungnam, CB: Chungbuk

Days to flowering, to maturity, days from planting to maturity of check variety : Teakwangkong(78, 55, 133days), Daewonkong(65, 78, 143days), Ilpumgeomjeongkong(62, 67, 129days), Pungsan-namulkong(78, 68, 146days), respectively

Table 3. The distribution of 100- seed- weight of soybean landraces by collecting sites of Korea.

GW: Gangwon, GG: Gyeonggi, GN: Gyeongnam, GB: Gyeongbuk, JN: Jeonnam, JB: Jeonbuk, JJ: Jeju, CN: Chungnam, CB: Chungbuk

100-seed-weight of check variety : Teakwangkong 23.2 g, Daewonkong 22.5 g, Ilpumgeomjeongkong 27.3 g, Pungsan-namulkong 11.9 g

Table 4. SSR markers used in this study, their associated chromosome number, major allele frequency, allele size range, the number of alleles per locus, gene diversity, heterozygosity, and polymorphism information content (PIC)
Table 5. Major allele frequency, the number of alleles, gene diversity, heterozygosity, polymorphism information content(PIC) based on soybean landraces by collecting sites of Korea.

GW: Gangwon, GG: Gyeonggi, GN: Gyeongnam, GB: Gyeongbuk, JN: Jeonnam, JB: Jeonbuk, JJ: Jeju, CN: Chungnam, CB: Chungbuk