Rice stripe virus (RSV) is one of the major constraints in rice production which is transmitted by the small brown plant hopper, Laodelphax striatellus. Identifying new resistance genes from diverse sources is important for rice breeding programs to enhance the resistance level and/or to overcome the breakdown of resistance genes. This study was conducted to identify novel sources of resistance against RSV. We used five RSV resistant varieties that do not harbor Stv-bⁱ. The presence of known genes for RSV resistance was identified using the InDel7 marker for Stv-bⁱ, two Indel (Sid primer set) markers for Stv-b, and DNA sequence analysis for OsSOT1. We revealed that two varieties, 02428 (IT236925) and Tung Ting Wan Hien 1, are novel RSV resistance sources.

The amylose contents of rice determine eating quality which is one of the major traits in rice breeding program. To identify the low-amylose gene of the japonica rice cultivar Baegjinju, genetic analysis was conducted using 200 F₂ population derived from a cross between the japonica cultivars, Saeilmi and Baegjinju. Individual F₂ plants were classified as wild type (translucent grain) and mutant type (dull grain) based on the grain appearance of brown rice. Two hundred F₂ plants were segregated into 155 wild type plants and 45 mutant type plants, which fit the 3:1 ratio (x² = 0.667, df = 1, p = 0.414) and this result indicated the low-amylose gene of Baegjinju is a single recessive gene which controls the amylose contents. Linkage analysis was conducted to localize the low-amylose gene of Baegjinju and fine mapped within an 800-kb interval between 17.5 to 18.8Mb on short arm of chromosome 10. Co-segregated SSR marker, RM25648 was developed and it could be useful for marker-assisted selection and determination of the genetic resource related with amylose contents in rice breeding.

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Bakanae (foolish seedling) disease caused by Gibberella fujikuroi creates serious problems in the foremost rice growing countries. This study was conducted to identify new resistance genetic sources to Bakanae disease. Bioassay showed that 11 varieties including Gwangmyeongbyeo, Hawn, Wonseadaesoo, Erguailai etc. were resistant to bakanae disease among 254 rice germplasm. Mismatch ratio between phenotype on bakanae disease bioassay and allele type of RM9, a SSR marker closely linked the bakanae disease resistant QTL, qBK1, were 38.3%. These results suggest that RM9 might be used for selecting qBK1, but it cannot be used for wide range of rice germplasm. Resistant germplasm in this study might be have resistant genes different from qBK1. The eleven varieties resistant to selected in this study will be used to identify new resistant alleles or genes to improve bakanae disease resistance in rice.

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