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"Jun-Hyeon Cho"

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"Jun-Hyeon Cho"

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유전자 보유 키다리병 중도저항성 중만생 내도복 다수성 찰벼 신품종 ‘진옥(眞玉)찰’
Development of a Mid-late Glutinous Rice Cultivar. ‘Jinokchal,’ a Variety Resistant to Bakanae Disease Harboring the qBK1 Gene
Sumin Jo, Ju-Won Kang, Ji-Yoon Lee, Jun-Hyeon Cho, Yeongho Kwon, So-Myeong Lee, Jisu Choi, Jong-min Jeong, Woo-Jae Kim, Jong-Hee Lee, Dong-Soo Park
Korean. J. Breed. Sci. 2025;57(3):271-278.
Published online September 1, 2025
DOI: https://doi.org/10.9787/KJBS.2025.57.3.271

Bakanae disease, caused by various Fusarium species, poses a significant threat to global rice production, with its incidence increasing in major rice-producing regions. Currently, no rice varieties exhibit complete resistance to this disease. Enhancing resistance in rice cultivars could serve as a cost-effective and sustainable alternative to fungicide application. Developing resistant rice varieties may offer a practical solution to mitigate yield losses and reduce dependency on chemical treatments. ‘Jinokchal’ was derived from the cross between ‘Milyang299’, which harbors bakanae disease-resistant QTL qBK1. and ‘Baekokchal’ in 2014. A promising line, YR31624-5B-2, was then selected and designated as ‘Milyang366’ in 2019. The local adaptability test of ‘Milyang366’ was conducted at five locations from 2020 to 2022, and the cultivar was subsequently named ‘Jinokchal. ’ The heading date of ‘Jinokchal’ was August 13, classifying it as a medium-late maturing cultivar. The culm was 77 cm long and had 108 spikelets per panicle. The 1,000 grain-weight of brown rice is 22.7 g, which is heavier than that of ‘Sinseonchalbyeo’. This variety is resistant to blast, rice stripe virus, and bacterial blight, but susceptible to insect pests. The yield potential of ‘Jinokchal’ was approximately 497 kg/10a at the ordinary fertilizer level in the local adaptability test over three years. ‘Jinokchal’ is moderately resistant to bakanae disease and harbors the qBK1 gene derived from the tong-il type rice ‘Shingwang’ (Registration No. 8135).

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통일형 벼 이앙 후 유묘기 재배안정성 증진을 위한 저온생장성 관련 QTL 탐색
Identification of QTLs Related to Plant Growth at Low Temperatures in the Seedling Stage of Tongil Type Rice after Transplanting
Seong-Gyu Jang, Ji-Yoon Lee, Ju-Won Kang, Youngho Kwon, So-Myeong Lee, Sais-Beul Lee, Jun-Hyeon Cho, Dong-Soo Park, Jong-Hee Lee, Soon-Wook Kwon, Sumin Jo
Korean. J. Breed. Sci. 2024;56(3):225-235.
Published online September 1, 2024
DOI: https://doi.org/10.9787/KJBS.2024.56.3.225

In Asia, where climate change is increasing the damage caused by cold stress, it is crucial to cultivate varieties with enhanced cold tolerance. In this study, the Tongil variety ‘Hanareum2’ was crossed with the Japonica variety ‘Unkwang’ to improve plant growth ability at low temperatures during the seedling stage. This led to the development of 234 recombinant inbred line (RIL) populations, and a linkage map was constructed using 249 single nucleotide polymorphism (SNP) markers. The RIL populations were transplanted to the field one month earlier than the standard transplanting period, and plant height (PH), leaf number (LN), and dry weight (DW) were measured to identify quantitative trait loci (QTL) associated with plant growth ability at low temperatures during the seedling stage. QTLs related to cold tolerance, particularly those carrying the ‘Unkwang’ allele, were identified in the PH and DW traits. For PH, the QTLs qPH1, qPH5, and qPH8 were located on chromosomes 1, 5, and 8, respectively. Regarding DW, the QTLs qDW1, qDW8, and qDW9 were identified on chromosomes 1, 8, and 9. For the LN trait, qLN3 carrying the ‘Hanareum2’ allele was located on chromosome 3. If the identified QTLs are utilized, they can be incorporated into breeding programs for plant growth at low temperatures during the seedling stage.

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국내 벼 주요 재배품종의 키다리병 저항성 평가
Evaluation of Major Rice Varieties for Bakanae Disease Resistance in Korea
Sais-Beul Lee, Ju-Won Kang, Ji-Yoon Lee, Gi-Un Seong, Youngho Kwon, So-Myeong Lee, Nkulu Rolly Kabang, Jun-Hyeon Cho, Seong-Hwan Oh, Dongjin Shin, Jong-Hee Lee, Ki-Won Oh, Dong-Soo Park
Korean. J. Breed. Sci. 2023;55(2):103-109.
Published online June 1, 2023
DOI: https://doi.org/10.9787/KJBS.2023.55.2.103

Bakanae disease, also known as the foolish seedling disease, caused by Gibberella fujikuroi, is a serious issue in Korea. Since 2007, there has been a rapid increase in the occurrence of bakanae disease; this has caused severe yield loss to rice farmers every year. The most reliable and economical solution for managing bakanae disease is to cultivate resistant varieties; however, there are only a few rice varieties in Korea that can withstand this disease. Therefore, this study aimed to evaluate the resistance of 61 major rice varieties which account for 89% of the total rice cultivation area. Only six varieties showed intermediate or higher resistance to bakanae disease; this included Anpyeong and Samkwang. The genetic inconsistency between the bioassay results and the allele types of 12 molecular markers (associated with four QTLs) ranged from 4.7% to 48.7%. Therefore, more accurate markers, such as gene-based markers, are essential for monitoring general breeding programs or gene pyramiding.

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New Cultivar Developed

유전자 보유 키다리병 중도저항성 중만생 최고품질 복합내병성 내도복 다수성 신품종 벼 품종 ‘안평(安平)’
Development of Mid-Late Rice Cultivar ‘Anpyeong’ Harboring qBK1, a Variety Resistant to Bakanae Disease with Premium Eating Quality and Multiple Disease Resistances
Dong-Soo Park, Ji-Yoon Lee, Jun-Hyeon Cho, Jong-Hee Lee, Ju-Won Kang, Sumin Jo, Yeongho Kwon, So-Myeong Lee, Sais-Beul Lee, Sung-Hwan Oh, Dong-Jin Shin, Byeong-Ju Kim
Korean. J. Breed. Sci. 2022;54(2):143-148.
Published online June 1, 2022
DOI: https://doi.org/10.9787/KJBS.2022.54.2.143

Bakanae disease is caused by several species of Fusarium and imposes serious limitations to rice production worldwide. The incidence of this disease is increasing in the top rice-growing countries. No rice variety has been found to be completely resistant to this disease. Thus, higher resistance to the disease may be a cost saving solution preferable to the application of fungicides. ‘Anpyeong’ was derived from the cross between ‘YR24982-9-1’ and ‘Saeilmi’ in 2012 and selected as the promising line, ‘YR30389-B-2GH-103’; it was further selected and designated as ‘Milyang 313’ in 2016. The local adaptability test for ‘Milyang 313’ was conducted at five locations from 2016 to 2018 and the cultivar was named ‘Anpyeong’. The heading date for the medium-late maturing cultivar ‘Anpyeong’ was August 13. The ‘Anpyeong’ culm was 77 cm long and had 115 spikelets per panicle. The brown rice 1,000 grain-weight was 22.2 g, which is higher than that of ‘Nampyeong’. This variety is resistant to blast disease and rice stripe virus, but susceptible to bacterial blight and insect pest. The potential ‘Anpyeong’ yield was approximately 562 kg/10 a at ordinary fertilizer level in the local adaptability test and for three years. ‘Anpyeong’ harboring the qBK1 gene derived from a tongil type rice ‘Shingwang’ is moderately resistant to bakanae disease (Registration No. 8135).

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Article

유전자 좌위 분자마커를 이용한 아밀로스 함량별 벼 품종 분류
Classification of Korean Rice Cultivars through Amylose Content Using Molecular Markers Targeting the Waxy Locus
So-Myeong Lee, Young-Ho Kwon, Ju-Won Kang, Ji-Yoon Lee, Sumin Jo, Dongjin Shin, Jin-Kyung Cha, Dong-Soo Park, Jun-Hyeon Cho, Jong-Hee Lee
Korean. J. Breed. Sci. 2021;53(4):361-372.
Published online December 1, 2021
DOI: https://doi.org/10.9787/KJBS.2021.53.4.361

A total of 285 Korean rice cultivars were used for amylose content and genetic analyses using KASP markers related to the amylose content. We used three polymorphic KASP markers targeting the Waxy (Wx) gene and compared the genotyping efficiency with previously reported molecular markers. The rice cultivars were raised in Miryang, Korea, for one period. Genetic analysis of the rice cultivars revealed that the three KASP markers on the Wx gene were functional for genomic selection of SNPs related to amylose content variation. Therefore, the three KASP markers targeting different Wx alleles can be used for genomic selection. In addition, KASP markers were more efficient than previously reported molecular markers that target the same alleles. These findings can be beneficial for the breeding and genomic selection of high-quality rice in Korea.

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New Cultivar Developed

동할미 발생이 적은 고품질 중만생종 벼 ‘영진’
Youngjin: A Rice Variety with Low Cracked Kernels, Mid-late Maturation, and Good Eating Quality
Jong-Hee Lee, Jun-Hyeon Cho, Ji-Yoon Lee, You-Chun Song, Dong-Soo Park, Dongjin Shin, So-Myeong Lee
Korean. J. Breed. Sci. 2021;53(1):77-82.
Published online March 1, 2021
DOI: https://doi.org/10.9787/KJBS.2021.53.1.77

The rice variety ‘Youngjin’ is a japonica rice (Oryza sativa L.) with good eating quality, lodging tolerance, and resistance to the rice stripe virus (RSV) and bacterial blight disease (BB). It was developed by the rice breeding team of the Department of Southern Crop, NICS, RDA, in 2016. This variety was derived from a three-way cross between ‘Iksan486’, ‘YR22722-B-B-B-25-1’, and ‘Chengmu,’ with good eating quality, in the summer of 2007. The pedigree of ‘Youngjin’ was YR27874Acp46-1, and was designated as ‘Miyang283’ in 2012. After local adaptability tests at five different locations from 2014 to 2016, it was released under the name ‘Youngjin’ in 2016. ‘Youngjin’ is a mid-late maturing ecotype with a short culm length of 67 cm. This variety was found to be resistant to the K1, K2, and K3 races of BB, and RSV, and moderately resistant to leaf blast disease. The milled rice kernels of ‘Youngjin’ were translucent and clear, without white core and belly, and had good eating quality, according to a panel test. This variety showed a lower percentage of cracked kernels compared to other susceptible cultivars. The milled rice yield of ‘Youngjin’ was 568 kg/10a, under normal levels of fertilization, determined by the local adaptability tests. This cultivar is adaptable to the Yeongnam plain area (Registration No. 7653).

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Article

93-11×밀양352 약배양 집단을 이용한 벼 출수기 QTL분석
QTL Analysis of Heading Date Using 93-11×Milyang352 Doubled Haploid Lines in Rice
So-Myeong Lee, Ju-Won Kang, Jun-Hyeon Cho, Ji-Yoon Lee, Dongjin Shin, Young-Ho Kwon, Jin-Kyung Cha, Sais-Beul Lee, Jong-Min Ko, Jong-Hee Lee
Korean. J. Breed. Sci. 2020;52(4):332-341.   Published online December 1, 2020
DOI: https://doi.org/10.9787/KJBS.2020.52.4.332

Rice doubled haploid (DH) lines derived from crosses of the indica cultivar 93-11 and japonica line Milyang352 were used in genetic mapping and QTL analysis studies of days to heading (DTH), an important trait that controls rice yield and biomass. QTL mapping was conducted using the inclusive composite interval mapping method. We used 234 single-nucleotide polymorphic markers in the whole-genome region, including 100 KASP markers and 134 Fluidigm markers, to construct a genetic map. DH populations were raised in Milyang, Korea, over three different periods. Two major DTH QTLs, qDTH3-1 and qDTH7, were detected under natural conditions in Milyang, and explained 14.88%~24.56% and 24.20%~37.39% of the phenotypic variation, respectively, in 93-11×Milyang352 DH populations. During three different rice cultivation periods, qDTH3-1 and qDTH7 were repeatedly detected with significant logarithm of the odds scores and phenotypic variability explained. The findings of this study will make a valuable contribution to breeding high-yielding and early-maturing rice in Korea.

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New Cultivar Developeds

통일형 벼 ‘신광’ 유래 키다리병 저항성 유전자 보유 ‘MY299BK’ 육성
Development of ‘MY299BK’, a Cultivar Resistant to Bakanae Disease Harboring qBK1 Gene Derived From a Tong-il Type Rice ‘Shingwang’
Sumin Jo, Sais-Beul Lee, Youn-Jae Hur, Ji-Yoon Lee, Jun-Hyeon Cho, No-Bong Park, Dong-Jin Shin, Jong-Hee Lee, Young-Bo Sohn, Snag-Ik Han, Seong-Hwan Oh, You-Chun Song, Dong-Soo Park
Korean. J. Breed. Sci. 2020;52(2):172-178.   Published online June 1, 2020
DOI: https://doi.org/10.9787/KJBS.2020.52.2.172

Bakanae disease is an important fungal disease caused by Gibberella fujikuroi. Incidence of rice bakanae disease creates serious problems in the foremost rice producing countries, affecting more or less all known rice cultivars. Breeding rice cultivars resistant to bakanae disease will thus be a cost-effective alternative to the application of fungicides. ‘MY299BK’ was derived from a cross between YR24982-9-1 and ‘Ilpum’ in 2008. A promising line, YR28297-1-38-1-1, was selected from among the progeny and designated ‘Milyang299’ in 2013. The local adaptability test of ‘Milyang299’ was carried out at five locations from 2014 to 2016 and named ‘MY299BK’. The heading date of ‘MY299BK’ was Aug. 15, typical for a medium-late maturing cultivar. Its culm was 71 cm long, there were 114 spikelets per panicle, and 1,000 grain-weight of brown rice was 23.4 g; these parameters were similar to those of ‘Nampyeong’. ‘MY299BK’ cultivar was resistant to blast and rice stripe virus, but susceptible to bacterial blight and insect pests. Its yield potential was about 566 kg/10 a at ordinary fertilizer level in a three-year-long local adaptability test. ‘MY299BK’ resistance to bakanae is conferred by the qBK1 gene derived from a tong-il type rice ‘Shingwang’ (Registration No. 7651).

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인디카 품종 IR72유래 흰잎마름병 저항성 및 노화촉진 계통 ‘MY298BB’
MY298BB, Bacterial Blight Resistance and Early Leaf senescence derived from Indica Variety ‘IR72’
Jong-Hee Lee, Un-Sang Yeo, Tae-Heon Kim, Dongjin Shin, Ju-Won Kang, Sais-Beul Lee, Ji-Yoon Lee, Jun-Hyeon Cho, Dong-Soo Park, You-Chun Song
Korean. J. Breed. Sci. 2020;52(1):62-68.   Published online March 1, 2020
DOI: https://doi.org/10.9787/KJBS.2020.52.1.62

Limitation of genetic diversity in japonica rice breeding populations is often identified as a potential obstacle for the development of high yielding cultivars. The use of diverse germplasm in rice breeding has been suggested as one way of combating this problem. This study was conducted to improve the genetic diversity for rice, by developing an advanced backcross population derived from a backcross ‘Junam’ as recurrent parent and ‘IR72’ as a donor parent. Among them, we selected a promising line ‘YR24438-B-B-B-B-132’ containing bacterial blight resistance gene Xa4. Testing in the replicated yield trial in 2009, the ‘YR24438-B-B-B-B-132’ line was selected, and it was designated as ‘Milyang298’. The local adaptability test of ‘Milyang298’ was carried out at three locations from 2014 to 2016 and it was named ‘MY298BB’. The average culm length in the replicated yield trials was 87 cm, which is 15 cm taller than recurrent parent ‘Junam’. Number of spikelets per panicle was significantly lower than in ‘Junam’ but the number of tillers per hill was higher. This variety is resistant to bacterial blight race K1, K2, K3, and K3a.However ‘MY298BB’ showed early leaf senescence at the mature stage and the chlorophyll content of ‘MY298BB’ was significantly lower than that of the recurrent parent ‘Junam’. Moreover the grain filling ratio and yield were significantly lower in ‘MY298BB’ than those of recurrent parent ‘Junam’. Therefore, understanding the leaf senescence mechanism would be useful for improving yield potential in rice.

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Articles
MAS를 이용한 줄무늬잎마름병 저항성 조생종 벼 ‘해담쌀’ 개발
Development of Early Maturing Rice Stripe Virus Disease-Resistant ‘Haedamssal’ through Marker-Assisted Selection
Jong-Hee Lee, Jun-Hyeon Cho, Ji-Yoon Lee, Seong-Hwan Oh, Choon-Song Kim, No-Bong Park, Un-Hwa Hwang, You-Chun Song, Dong-Soo Park, Un-Sang Yeo
Korean. J. Breed. Sci. 2019;51(4):448-453.   Published online December 1, 2019
DOI: https://doi.org/10.9787/KJBS.2019.51.4.448

‘Haedamssal’ is an early maturing and rice stripe virus disease-resistant cultivar adaptable for early-transplanting cultivation that was developed by the rice breeding team of the Department of Southern Crop, NICS, RDA, in 2014. This cultivar was derived from the cross YR25869 (YR21247-B-B-B-49-1/Sasanishiki BL4//Koshihikari) and YR25868 (Unkwang//YR21247-B-B-B-49-1/Sasanishiki BL4) made in the 2005/2006 winter season and was advanced to the F5 generation by a bulk breeding method using rapid generation advance. To incorporate rice stripe virus resistance, marker-assisted selection on the RSV gene was conducted in 3-way and 6-way cross F1 generation using the tightly linked marker RM6897. From testing in the replicated yield trial in 2011, a promising line YR26258-B-B-B-33-3 was selected and it was designated as ‘Milyang276’. A local adaptability test of ‘Milyang276’ was performed at three locations from 2012 to 2014 and it was named as ‘Haedamssal’, which was a good eating quality variety. The culm length was 67 cm in yield trials, which was 4 cm shorter than ‘Jopyeong’. The number of spikelets per panicle was lower than ‘Jopyeong’, whereas the number of tillers per hill was higher. This variety was resistant to RSV disease, bacterial blight, and leaf blast disease. The milled rice yield of ‘Haedamssal’ was 5.48 MT per ha at the early transplanting in the local adaptability test. ‘Haedamssal’ is well adapted to early transplanting cultivation in the southern plain area (Registration No. 6811).

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한아름2호 × 운광 재조합 집단을 이용한 수량 관련 형질 QTLs 분석
QTL Analysis of Yield Traits Using Hanareum2/Unkwang Recombinant Inbred Lines
Ji-Yoon Lee, Ju-Won Kang, Jun-Hyeon Cho, Jong-Hee Lee, Un-Sang Yeo, You-Chun Song, Dong-Soo Park, Jong-Min Ko
Korean. J. Breed. Sci. 2019;51(4):404-414.   Published online December 1, 2019
DOI: https://doi.org/10.9787/KJBS.2019.51.4.404

The rice recombinant inbred lines derived from Hanareum2 and Unkwang (HURILs) cross were used in genetic mapping and QTL analysis studies using the inclusive composite interval mapping (ICIM) method. In this study, we constructed the genetic map using 241 SNP markers based on the SNPs in the whole genome region between these varieties. As a result, the total genetic distance and average distances were 1,142 cM and 4.7 cM, respectively. Both heading date and plant height are important traits related to grain yield in rice. Twelve heading date QTLs were detected under natural condition in Korea. A major QTL qDTH3-2 for heading date and qCL1-2 for plant height explained 25.8~27.4% and 30.8~56.9% of the phenotypic variations in the HURIL populations. Four panicle traits, grain number (GN), panicle length (PL), number of panicle per plant (NPP), grain filling ratio (GFR) were evaluated for QTL effects in HURILs population during two years. Results showed that a total of twelve QTLs for GN, PL, NPP, and GFR were detected on chromosome 2, 3, 4, 6, 7, 8. A major QTL qGNP4 for GN was detected in HURIL populations with LOD score 7.7-19.3 and explained 6.7-17.69% of phenotypic variations. Twenty-five QTLs for the four traits TGW, GL, GW, and GT were identified in the HURIL populations for two years (2014~2015). The three QTLs, qTGW8, qGL8-2, and qGW8-2, shared the same interval between id8007093 and id8007764 on chromosome 8 with explained 4.8-4.1%, 4.2-6.8%, and 5.3-10.5% of phenotypic variations, respectively. Furthermore, two QTLs, qTGW3-2 and qGL3-2, were detected in the same chromosomal interval at the same position. These findings will benefit breeding design for development of high yielding variety in rice.

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한국 자포니카 품종에서 벼퉁그로 바이러스병 저항성 탐색
Identification of Resistance to Rice Tungro Virus Disease in Korean Japonica Rice Cultivars
Jong Hee Lee, Jun-Hyeon Cho, Ji-Yoon Lee, Ju-Won Kang, Dongjin Shin, Sumin Jo, Il-Ryong Choi, You-Chun Song, Dong-Soo Park, Jong-Min Ko
Korean. J. Breed. Sci. 2019;51(2):86-90.   Published online June 1, 2019
DOI: https://doi.org/10.9787/KJBS.2019.51.2.86

Rice tungro disease is a serious threat to rice production in South and Southeast Asian countries. Rice production in these countries has been intensified, often through continuous cultivation of rice. We conducted a screen of the resistance to tungro virus disease in Korean japonica rice. Dongjin, Hwaseong, and Sangju were varieties resistant to Rice tungro spherical virus (RTSV) but susceptible to Rice tungro bacilliform virus (RTBV). RTSV-resistant variety Sangju was crossed with RTSV-susceptible variety Unkwang to conduct a genetic analysis for RTSV resistance originating from Sangju. Evaluation of 201 F2 plants from the cross between Unkwang and Sangju showed that there were 85 plants showing resistance, and that 116 plants were susceptible, indicating a ratio fitting a 7:9 ratio ratio (χ2 = 0.54; p = 0.46). Thus, the resistance to RTSV in Sangju might be controlled by two recessive genes. This result indicates that Sangju might serve as a useful genetic source for diversification of RTSV resistance and stabilization of resistance through gene pyramiding.

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소득작물 후작용 고품질 조생 벼품종 ‘화왕’
‘Hwawang’: A Good Quality and Early-Maturing Rice Variety Adaptable for Rice–Cash Crop Rotation System
Jong-Hee Lee, Ji-Yoon Lee, Un-Sang Yeo, You-Chun Song, Dong-Soo Park, Un-Hwa Hwang, Soo-Gwan Park, No-Bong Park, Sang-Yeol Kim, Seong-Hwan Oh, Sang-Ik Han, Min-Hee Nam, Jong-Gi Lee, Jun-Hyeon Cho
Korean. J. Breed. Sci. 2018;50(4):534-539.   Published online December 1, 2018
DOI: https://doi.org/10.9787/KJBS.2018.50.4.534

‘Hwawang’ is an early maturing and short statured rice cultivar adaptable to the rice–cash crop rotation system that was developed by the rice breeding team of the Department of Southern Crop, National Institute of Crop Science (NICS), Rural Development Administration (RDA), Korea, in 2012. This cultivar was derived from the cross of YR25867 (Hitomebore//YR21247-B-B-B-49-1/Sasanishiki BL4) and YR25866 (Akidagomachi//YR21247-B-B-B-49-1/Sasanishiki BL4) during the 2005/2006 winter season and was fixed as a homozygous line by a doubled haploid breeding system. In the replicated yield trial in 2009, a promising line (YR26253Acp26-1) showed a good phenotype and high yield potential, and so it was selected and designated as ‘Milyang256’. The local adaptability test of ‘Milyang256’ was carried out at three locations from 2010 to 2012. It was named ‘Hwawang’ and had a high head rice ratio and good eating quality. The culm length of ‘Hwawang’ averaged 62 cm during the yield trials and was 10 cm shorter than that of ‘Keumo’. The number of spikelets per panicle of ‘Hwawang’ was significantly lower than that of ‘Keumo’, but the number of tillers per hill was higher. This variety showed resistance to bacterial blight disease but was moderately susceptible to both leaf and neck blast. The milled rice yield of ‘Hwawang’ was 452 kg/10 a at the late transplanting stage of the local adaptability test. Thus, ‘Hwawang’ is well adapted to the rice–cash crop rotation system in the southern plain area. (Registration No. 5106)

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쌀면전용 고아밀로스 중생 통일형 벼 ‘새미면’
‘Saemimyeon’, a Tongil-Type Medium-Late Maturing Rice Variety with High Amylose ContentUsed for Rice Noodle Preparation
Jun-Hyeon Cho, Jong-Hee Lee, No-Bong Park, Young-Bo Son, Sung-Hwan Oh, Sang-Ik Han, You-Chun Song, Woo-Duck Seo, Dong-Soo Park, Min-Hee Nam, Ji-Yoon Lee
Korean. J. Breed. Sci. 2018;50(4):522-528.   Published online December 1, 2018
DOI: https://doi.org/10.9787/KJBS.2018.50.4.522

Saemimyeon, a Tongil type, medium-late maturing rice variety, is especially used for preparing rice noodles. Its high amylose content was developed to fit market demands and to be affordable for rice processing industries. One of the high yielding lines, Milyang181 (Hanareum), was used in the final three-way cross of IR50*2/YR18241-B-B-115-1-1 for yield improvement and cultivation stabilization, including disease resistance. YR24235-10-1-3, a high yielding and compact plant type, was selected and named Milyang278 after yield test at NICS (RDA, Miryang) in 2010. It was subjected to regional yield test at six sites in the middle and southern plain areas of South Korea. Saemimyeon heading occurs on August 12 and is a mid-late maturing cultivar, with resistance to leaf blast, rice stripe virus, and bacterial blight (K1-K3a), but it is susceptible to major diseases and insect pest infestation. Saemimyeon showed a high amylose content of 26.7%, with a relatively low KOH digestion value of 3.5, which are key factors in rice noodles and pasta processing. In the local adaptability tests, the yield of Saemimyeon was 7.08 MT/ha—an increase of approximately 106% compared to that of Dasan. Thus, Saemimyeon is suitable for cultivation in the southern and middle plain areas of South Korea.

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통일형 벼에서 메소트리온계 제초제 저항성 연관 DNA marker 탐색
Identification of DNA Markers Related to Resistance to Herbicide Containing Mesotrione in Tongil Type Rice
Ji-Yoon Lee, Jun-Hyeon Cho, Jong-Hee Lee, Su-Min Cho, Young-Ho Kwon, Dong-Soo Park, You-Chun Song, Jong-Min Ko
Korean. J. Breed. Sci. 2018;50(4):387-395.   Published online December 1, 2018
DOI: https://doi.org/10.9787/KJBS.2018.50.4.387

This study was conducted to identify DNA markers related to resistance to herbicide containing mesotrione in Tongil type rice. Two Tongil type elite lines; Milyang154 and Suweon382, showed resistance to mesotrione, whereas the others were susceptible at 20 days after mesotrione application, and severe growth inhibition was observed in the remaining 13 lines. As a result of analysis of mesotrione resistance using 190 F2 populations derived from a cross of Hanareum2 (susceptible) and Milyang154 (resistant), the mesotrione resistance locus was shown to be a single dominant gene with a 3:1 segregation ratio (X2=1.19, P=0.31). To identify a DNA marker closely linked to the mesotrione resistance gene, bulked segregant analysis (BSA) was adopted. The DNA marker RM3501 was identified on chromosome 2 with a recombinant value of 0.53 to the mesotrione resistance gene. Mst1(t) was located between SSR (simple sequence repeat) markers RM3501 and RM324 with a physical map distance of 10.2 Mb–11.4 Mb on chromosome 2. The band pattern of agarose gel electrophoresis of the SSR marker RM3501 showed the same segregation pattern with respect to mesotrione treatment in 20 Tongil type varieties and a BC2F2 segregation population derived from a cross between Unkwang (resistant) and Hanareum2 (susceptible). Thus, the RM3501 DNA marker could be used in breeding programs for Marker Assisted Selection in mesotrione resistant rice breeding.

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중만생 항산화 적색메벼 ‘건강홍미’
Antioxidant Functional and Red Pericarp Rice ‘Geonganghongmi’
You-Chun Song, Jun-Hyeon Cho, Ji-Yoon Lee, Jong-Hee Lee, Sung-Hwan Oh, Sang-Ik Han, Kuk-Hyun Jung, Woo-Duck Seo, Woon-Ha Hwang, Ki-Chang Jang, No-Bong Park, Dong-Soo Park, Sang-Yeol Kim, Hang-Won Kang, Hak-Dong Lee
Korean. J. Breed. Sci. 2017;49(1):23-30.   Published online March 1, 2017
DOI: https://doi.org/10.9787/KJBS.2017.49.1.23

To fit the market demands for functional rice such as black and red color rice, ‘Sugary’a high free sugar content line was backcrossed to the black rice ‘Milyang152. The pedigree method was adapted in selection and generation advance. A high polyphenol content line, YR19646-3-2-1-1-2-2 showing red pericarp was selected and designed as ‘Milyang234’ followed by variety name ‘Geonganghongmi’ in 2010. Heading date of ‘Geonganghongmi’ was Aug. 19, medium-late maturing cultivar. ‘Geonganghongmi’ showed resistance to leaf blast and rice stripe virus while susceptible to major diseases and insects. The total polyphenol content of ‘Geonganghongmi’ was high as much as 24.2mg/g compare to that of 4.9mg/g of ‘Nampyeongbyeo’ and 17.2mg/g of a red pericarp rice ‘Jeogjinju’ at 70% ethanol extraction conditions. In local adaptability tests, yield of ‘Geonganghongmi’ was 4.5MT/ha about 86% of ‘Nampyeongbyeo’ and 102% of ‘Jeogjinju’, respectively. ‘Geonganghongmi’ is suitable for southern and middle plain area of Korea.

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완전미율이 우수한 조생종 벼 중간모본 “중모1019호”
“Jungmo1019”: High Head Rice Ratio and Early-Maturing Rice Germplasm Line
Jong-Hee Lee, Un-Sang Yeo, Choon-Song Kim, Ji-Yoon Lee, You-Chun Song, No-Bong Park, Seong-Hwan Oh, Sang-Yeol Kim, Kuk-Hyun Jung, Woo-Jae Kim, Young-Bo Sohn, Jun-Hyeon Cho
Korean. J. Breed. Sci. 2016;48(3):378-383.   Published online September 30, 2016
DOI: https://doi.org/10.9787/KJBS.2016.48.3.378

Jungmo1019 early maturing rice variety was developed by the rice breeding team of the Department of Southern Crop, NICS, RDA in 2011. This cultivar was derived from the cross Hwayeongbyeo//Hitomebore/Nampyeongbyeo made in 2005 and the production of doubled haploid rice plant from anther culture in F1 generation. Testing in the replicated yield trial in 2008, a promising line YR25312Acp62 was selected and it was designated as the Milyang246. The early traus plauting local adaptability test of Milyang246 was carried out at three location in 2011 and it was named as Jungmo1019 showing a high head rice ratio and early–maturity eco-type. Number of spikelet/panicle and 1,000 grain weight of brown rice was slightly lower than those of Jopyeongbyeo. This variety is resistant to bacterial blight, rice stripe virus disease but susceptible to major insect and pests. The milled rice yield of Jungmo1019 is 4.52MT per ha at the early transplanting of the local adaptability test. This line should serve as a useful source for improving head rice ratio at early transplanting cultivation in southern plain area.

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백진주의 저아밀로스 유전분석 및 분자지도 작성
Genetic Analysis and Molecular Mapping of Low Amylose Gene in Rice Cultivar ‘Baegjinju’ (Oryza sativa L.)
Jong-Hee Lee, Jun-Hyeon Cho, Ji-Yoon Lee, Young-Bo Sohn, Sang-Ik Han, Dongjin Shin, You-Chun Song, Dong-Soo Park, Un-Sang Yeo, Myeong- Gyu Oh, Yeon-Jae Hur
Korean. J. Breed. Sci. 2016;48(3):234-240.   Published online September 30, 2016
DOI: https://doi.org/10.9787/KJBS.2016.48.3.234

The amylose contents of rice determine eating quality which is one of the major traits in rice breeding program. To identify the low-amylose gene of the japonica rice cultivar Baegjinju, genetic analysis was conducted using 200 F2 population derived from a cross between the japonica cultivars, Saeilmi and Baegjinju. Individual F2 plants were classified as wild type (translucent grain) and mutant type (dull grain) based on the grain appearance of brown rice. Two hundred F2 plants were segregated into 155 wild type plants and 45 mutant type plants, which fit the 3:1 ratio (x2 = 0.667, df = 1, p = 0.414) and this result indicated the low-amylose gene of Baegjinju is a single recessive gene which controls the amylose contents. Linkage analysis was conducted to localize the low-amylose gene of Baegjinju and fine mapped within an 800-kb interval between 17.5 to 18.8Mb on short arm of chromosome 10. Co-segregated SSR marker, RM25648 was developed and it could be useful for marker-assisted selection and determination of the genetic resource related with amylose contents in rice breeding.

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벼 키다리병 저항성 유전자원 탐색
Screening of Rice Germplasm for Bakanae Disease Resistance in Rice
Yeon-Jae Hur, Sais-Beul Lee, Dongjin Shin, Tae-Heon Kim, Jun-Hyeon Cho, Sang-Ik Han, Seong-Hwan Oh, Ji-Yoon Lee, Young-Bo Son, Jong-Hee Lee, Tackmin Kwon, No-Bong Park, Sang-Yeoul Kim, You-Chun Song, Min-Hee Nam, Young-Up Kwon, Dong-Soo Park
Korean. J. Breed. Sci. 2016;48(1):22-28.   Published online March 31, 2016
DOI: https://doi.org/10.9787/KJBS.2016.48.1.022

Bakanae (foolish seedling) disease caused by Gibberella fujikuroi creates serious problems in the foremost rice growing countries. This study was conducted to identify new resistance genetic sources to Bakanae disease. Bioassay showed that 11 varieties including Gwangmyeongbyeo, Hawn, Wonseadaesoo, Erguailai etc. were resistant to bakanae disease among 254 rice germplasm. Mismatch ratio between phenotype on bakanae disease bioassay and allele type of RM9, a SSR marker closely linked the bakanae disease resistant QTL, qBK1, were 38.3%. These results suggest that RM9 might be used for selecting qBK1, but it cannot be used for wide range of rice germplasm. Resistant germplasm in this study might be have resistant genes different from qBK1. The eleven varieties resistant to selected in this study will be used to identify new resistant alleles or genes to improve bakanae disease resistance in rice.

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저글루테린 및 저아밀로스 중생종 기능성 벼 ‘건양2호’
‘Geongyang2’: Low Glutelin and Amylose Content Rice Cultivar with Mid-Maturing
Jong-Hee Lee, Ji-Yoon Lee, You-Chun Song, Un-Sang Yeo, No-Bong Park, Choon-Song Kim, Young-Bo Sohn, Dong-Soo Park, Sang-Ik Han, Sang-Yeol Kim, Woo-Jae Kim, Dae-Sik Choi, Min-Hee Nam, Jong-Gi Lee, Jun-Hyeon Cho
Korean. J. Breed. Sci. 2015;47(4):437-441.   Published online December 31, 2015
DOI: https://doi.org/10.9787/KJBS.2015.47.4.437

In chronic renal failure, to reduce the burden on the kidneys, it is necessary to provide patients with therapy based on a low-protein diet. To cope with this situation, low and easy to-digest protein rice variety is helpful. ‘Geongyang2’, low glutelins rice cultivar, was developed by the National Institute of Crop Science (NICS), RDA, Miryang, Korea in 2012. ‘Geongyang2’was derived from a cross between ‘Junambyeo’and‘Chugoku 173’ as a source of low glutelin and amylose. The pedigree of ‘Geongyang2’was YR24174-B-B-B-B-46 and designated as the ‘Milyang262’ in 2009. The local adaptability test of ‘Milyang262’ was carried out at six locations from 2010 to 2012. ‘Geongyang2’ is a mid-maturing ecotype with 65cm in culm length and the number of spikelet/panicle and 1,000 grain weight of brown rice were slightly lower compared to those of ‘Nampyeongbyeo’. ‘Geongyang2’ is resistant to bacterial blight and virus disease while susceptible to major insect and pest. The glutelin and amylose contents of ‘Geongyang2’ were 63.1% and 11.5%, respectively. The milled rice yield of ‘Gyeongyang2’ is 4.61MT/ha at the ordinary transplanting of the local adaptability test. This cultivar would be adaptable to the plain paddy field of middle, honam and yeongnam province of Korea under ordinary cropping system.

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중만생 기능성 당질미 ‘단미’
‘Danmi’: A Medium-late Maturing Sugary Rice
You-Chun Song, Jong-Hee Lee, Ji-Yoon Lee, Choon-Song Kim, Se-Ri Kim, Kuk-Hyun Jung, No-Bong Park, Do-Yeon Kwak, Woon-Goo Ha, Jeom-Sig Lee, Hang-Won Kang, Jun-Hyeon Cho
Korean. J. Breed. Sci. 2015;47(4):431-436.   Published online December 31, 2015
DOI: https://doi.org/10.9787/KJBS.2015.47.4.431

‘Danmi’, a sugary rice (Oryza sativa L.), was developed by the Department of Functional Crops, NICS, RDA in 2008. This variety was derived from a cross between ‘Sugary’ a genetic stock of germplasm as a source of sugary endosperm and ‘Seomjinbyeo’ in summer of 1994. The pedigree of ‘Danmi’ is YR16541-14-3-1-2-1-1-3-1-1 which was designated as ‘Milyang 227’ in 2005. Heading date of ‘Danmi’ is August 19, a medium-late maturing ecotype. The total sugar content of ‘Danmi’ was 21.7% with fructose (1.16%), glucose (7.87%), sucrose (9.69%), maltose (0.52%), and raffinose (2.13%), respectively. The appearance of grain is flat shape with 1,000 grain of brown rice is 16.1g. The yield potential of ‘Danmi’ in brown rice is 2.58MT/ha at ordinary fertilizer level of local adaptability test from 2006 to 2008. The sugary rice ‘Danmi’ would be adaptable to the plain paddy field of middle, honam and yeongnam province of Korea.

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영남평야지 적응 중만생 고품질 벼 ‘진수미’
‘Jinsumi’: A High Grain Quality Rice Cultivar with Mid-Late Maturity
Jun-Hyeon Cho, Jong-Hee Lee, Choon-Song Kim, Ji-Yoon Lee, Sung-Hwan Oh, No-Bong Park, Myeong-Gi Jeon, Do-Yeon Kwak, Dong-Su Park, Un-Sang Yeo, Woon-Goo Ha, Myeong-Gi Kim, Jeom-Sig Lee, Hang-Won Kang, Min-Hee Nam, You-Chun Song
Korean. J. Breed. Sci. 2015;47(2):135-139.   Published online June 30, 2015
DOI: https://doi.org/10.9787/KJBS.2015.47.2.135

Recently, concerns have been voiced about the high eating quality rice in the market. To cope the high quality demands in rice market, a rice cultivar ‘Jinsumi’ which is showing high grain quality and multi-resistant to diseases was developed by the National Institute of Crop Science, RDA, Miryang, Korea. ‘Jinsumi’ was derived from a three-way cross of ‘Milyang165’ and F1 plant of YR16195-B-B-B-21-1/Milyang169. The pedigree of ‘Jinsumi’ was YR21999-B-B-B-17-3-1 and designated as ‘Milyang 218’ in 2005. Heading date of ‘Jinsumi’ was August 15 as mid-late maturing ecotype. ‘Jinsumi’ showed multi resistant to rice stripe virus (RSV), bacterial blight races of K1, K2, K3 and moderately resistant to leaf blast disease. The grain appearance of ‘Jinsumi’ was translucent and showed 96.6% of head rice ratio. The milled rice yield of ‘Jinsumi’ was 5.74 MT/ha at ordinary transplanting of local adaptability test. ‘Jinsumi’ would be adaptable to the plain area of Yeongnam province in Korea.

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기능성 흑찰거대배아미 조생종 벼 품종 ‘눈큰흑찰’
A Waxy Black Giant Embryo Earley Maturing Rice Variety ‘Nunkeunheugchal’
Dong-Soo Park, Un-Ha Hwang, Soo-Kwon Park, Jong-Hee Lee, Sang-Ik Han, Jun-Hyeon Cho, Ji-Yoon Lee, Seong-Hwan Oh, Ki-Chang Jang, Woo-Duck Seo, Dong-Jin Shin, Sang-Yeol Kim, You-Chun Song, Un-Sang Yeo, No-Bong Park, Min-Hee Nam, Jong-Ki Lee
Korean. J. Breed. Sci. 2015;47(1):68-74.   Published online March 31, 2015
DOI: https://doi.org/10.9787/KJBS.2015.47.1.068

Nunkeunheugchal (registration No. 01-0001-2014-4), a black waxy giant embryo rice cultivar, was developed by the rice breeding team of National Institute of Crop Science (NICS), RDA in 2012. This cultivar was derived from the cross between get and Josaengheugchal in 2004/2005 winter season, and selected by a promising line, YR25277-B-B-314-2, was selected and designated as the line of Milyang263 in 2009. The local adaptability test of Milyang263 was carried out at four locations from 2010 to 2012 and it was named as Nunkeunheugchal. This variety is a early maturity cultivar. It has 65 cm in culm length and 72 spikelets per panicle, and 1,000 grain-weight of brown rice is 17.8 g which is less than that of Josaengheugchal. This variety is resistant to leaf blast, but susceptible to bacterial blight, neck blast, virus disease and insect pest. The yield potential of Nunkeunheugchal was about 3.54 MT/ha as brown rice at ordinary fertilizer level in local adaptability test for three years. Nunkeunheugchal possesses benefits to rice consumers because of high amounts of GABA, anthocyanin, calcium and iron. This variety would be adaptable to the paddy field of middle and southern plain region of Korea.

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